PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT18103
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family MYB_related
Protein Properties Length: 260aa    MW: 29074.4 Da    PI: 5.9364
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT18103genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.71.5e-099332348
                     -HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48
                     +W++Ia++++ gRt++++k++w+ +l
         EMT18103  9 RWSLIASHLP-GRTDNEIKNYWNLHL 33
                     5*********.***********9875 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.496137IPR017930Myb domain
CDDcd001671.92E-7733No hitNo description
PfamPF002491.8E-7833IPR001005SANT/Myb domain
SuperFamilySSF466892.42E-8837IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.6E-12834IPR009057Homeodomain-like
PfamPF066401.3E-1251260IPR010588Myb-related protein P, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    Send to blast
MHLVVLTDRW SLIASHLPGR TDNEIKNYWN LHLRRQFHSF KQTYTANNST TITIDINKLS  60
ATNRKRRGGQ APGQLPRSST KKHPVPKPAK PQDGSSPIGA TSSASCLPQS NQDQNQPINI  120
TVSRTFGEPY SGNGLCHMVR ENIDQNGGVL EPNSAIDWIK LWEPNNSMNH IGLLEDESEM  180
EALLSSIDLT ASGHSVIEHG GRSWLEDLLD MDMDWEGFVS HLCGQSAQND LLRTTIPHEM  240
TGSEVSKFEQ FVSWLLSDEF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003558096.11e-78PREDICTED: myb-related protein P-like
TrEMBLR7W9C60.0R7W9C6_AEGTA; Myb-related protein P
STRINGBRADI1G64687.13e-78(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP7938563
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47460.14e-14myb domain protein 12